CDS

Accession Number TCMCG017C10027
gbkey CDS
Protein Id OMP01612.1
Location join(242498..242508,242827..242884,243307..243564,243960..244133,244218..244348,244635..244995,245069..245200,245561..245647,245752..245879,247486..247606,247687..247838,247907..248042,248735..248858,248932..249002,249100..249168,249383..249505,249593..249751,249894..249974,250049..250210,250327..250382,250949..251081,251185..251279,251566..251764)
GeneID InterPro:IPR001650
Organism Corchorus olitorius
locus_tag COLO4_11772

Protein

Length 1006aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01014740.1
Definition hypothetical protein COLO4_11772 [Corchorus olitorius]
Locus_tag COLO4_11772

EGGNOG-MAPPER Annotation

COG_category A
Description ATP-dependent DNA helicase Q-like
KEGG_TC -
KEGG_Module M00295        [VIEW IN KEGG]
M00414        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03032        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
KEGG_ko ko:K03654        [VIEW IN KEGG]
ko:K10901        [VIEW IN KEGG]
EC 3.6.4.12        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko03018        [VIEW IN KEGG]
ko03440        [VIEW IN KEGG]
ko03460        [VIEW IN KEGG]
map03018        [VIEW IN KEGG]
map03440        [VIEW IN KEGG]
map03460        [VIEW IN KEGG]
GOs GO:0000724        [VIEW IN EMBL-EBI]
GO:0000725        [VIEW IN EMBL-EBI]
GO:0001101        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003678        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004003        [VIEW IN EMBL-EBI]
GO:0004386        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005911        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006281        [VIEW IN EMBL-EBI]
GO:0006302        [VIEW IN EMBL-EBI]
GO:0006310        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0008026        [VIEW IN EMBL-EBI]
GO:0008094        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009266        [VIEW IN EMBL-EBI]
GO:0009378        [VIEW IN EMBL-EBI]
GO:0009409        [VIEW IN EMBL-EBI]
GO:0009506        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009719        [VIEW IN EMBL-EBI]
GO:0009725        [VIEW IN EMBL-EBI]
GO:0009737        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0016887        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0030054        [VIEW IN EMBL-EBI]
GO:0032392        [VIEW IN EMBL-EBI]
GO:0032508        [VIEW IN EMBL-EBI]
GO:0032870        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0033993        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042623        [VIEW IN EMBL-EBI]
GO:0043138        [VIEW IN EMBL-EBI]
GO:0043140        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0055044        [VIEW IN EMBL-EBI]
GO:0070035        [VIEW IN EMBL-EBI]
GO:0070417        [VIEW IN EMBL-EBI]
GO:0070887        [VIEW IN EMBL-EBI]
GO:0071103        [VIEW IN EMBL-EBI]
GO:0071215        [VIEW IN EMBL-EBI]
GO:0071229        [VIEW IN EMBL-EBI]
GO:0071310        [VIEW IN EMBL-EBI]
GO:0071396        [VIEW IN EMBL-EBI]
GO:0071495        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0097305        [VIEW IN EMBL-EBI]
GO:0097306        [VIEW IN EMBL-EBI]
GO:0140097        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901700        [VIEW IN EMBL-EBI]
GO:1901701        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCTGCAAGGTTAACGGTCTGCCGGATTCAGAATTCTCAAAAATTTCATCATTCTCAGGTTGAAAAGCATAACAGCAATGAAACCAATGGCAAGATCAGTGAATTGGGAAGGTGCATGGCCAGTTCTTTTCCATCAAGTAATGTCAATGCTATGGGAGATGGTGATAATCTACAATGGCACAGTGAAGCTAAAGCATCCATGTTCAACAATAGTAATACTAAAGTTTTAGGTGGATCGTTAAGGAATCCATCTGTCCATTCTGGCCAACTGAAGCAGTCTGCGGAGGTTTTGGCTAATGAAATTGACGATGATGACTTACTCAAGGACATTGATGTGGACCAGATTGTGTCAGAACACTATCAATCAACTTGCACACTGCAACCTTCAGTTTCTAAGTTTCCACCCATTACCCCAAGTGTAGATAAAAAAGCCTTTTCAGGACAAGAAGAACCTCGTTTGCCTCCTGAATTATGCTCAATCTGCAGTCATGGGTGTCAGCTAGGACTATGCCCAGAAGCTGCAAGTCATTTGCAGGAAAAGAAGGATATGTTAATTGCTGTGTCAAATGAATTGCTTGACAATGCTACGAACCTGAGTCCAGATCAGATTGAGAAGCTTCGCCAAAACAGGTTACAGCTGAATAGGCAAATTCAGCTGCTGGAAAAACATCTCTCTGATGTGGAAAGGCAAAAGTCACATTTCTCAGCATCAACAGCCACCCGCACCTTTCAGTATGGGACACCACAATCAGCTTCAATCAGCACTGAACCAATTCGATTTGATGCCCAGGTTCATTTACATAATGAACCAAATGGGTATGAGAATTGGAATTCATCATCAGTTTCTTTCTCTTCTGCAAATAGTATCGGTGTTTCCGGTGGTGTGGGAAGAAAACCATACATTCCTAAGATTGTTGAAGTAAATTATATTGAGGGTTCACATGACCAAAAGTGGAGTAGTAGAGATTTCCCCTGGACTAAAAAGCTGGAGGCCAATAACAAGAAGGTGTTTGGGAATCATTCATTTCGCCCCAACCAAAGAGAGATTATTAATGCTACGATGAGCGGGTGTGATGTTTTTGTTCTTATGCCTACAGGAGGAGGCAAGAGCTTGACATATCAGCTGCCTGCTCTTATCTGTCCGGGAATAACATTGGTGATTTCTCCCCTTGTGTCTCTCATCCAAGATCAAATAATGCATTTATTGCAGGCAAATATACCTGCTGCTTACTTAAGTGCCAATATGGATTGGCCTGAACAACTGGAGATCCTTAGAGAGCTTACTTCTGATTACTGTAAATACAAACTGTTATACGTCACTCCTGAGAAAGTGGCCAGGAGTGATGTCCTGTTGCGGCACTTGGACAGTCTGAATACACGTGATTTGCTTGCAAGGATTGTTATTGACGAAGCTCATTGTGTGAGTCAGTGGGGGCATGACTTCAGACCAGATTATCAGGGCCTTGGTATCTTGAAACAGAAGTATCCAAAGACTCCGGTTTTAGCTTTAACAGCGACTGCAACAGCTAGTGTAAAAGAAGATGTTGTGCAAGCTCTTGGTCTTGTTAACTGCACTATATTCAGACAAAGTTTTAATCGGCCAAATCTATGGTTTTCTGTTATCCCCAAAACCAAGAAGTGTGTGGAGGACATTGACAAGTTCATTAAAGAGAATCATTTTGATGAATGTGGAATAATTTATTGCCTTTCAAGAATGGACTGTGAAAAAGTTGCTGAGAAGTTGCAGGAATATGGACATAAGGCAGCATTTTACCATGGTAATATGGATCCTGCACAACGTGCTTCTACTCAGAAGCAGTGGAGCAAAGATGAGATCAACATAATTTGTGCTACAGTGGCATTTGGAATGGGTATCAACAAACCGGATGTTCGATTTGTCATTCATCATTCACTTCCAAAATCAATCGAAGGTTACCATCAGGAGTGTGGCCGTGCTGGTCGAGATGGTCAACGCTCATCTTGCATATTGTATTATAGTTATAGTGACTATATACGAGTCAAGCATATGATAAGTCAAGGAGTTGTAGAACAAAGTCCCTTAGTAAGTGGATATAATCGCTTCAATAATTCAGGGAGGATACTGGAAACAAACACTGAAAATCTCTATCGCATGGTCAGTTATTGTGAAAATGATGTTGATTGTCGACGTCTTCTACAGCTTCTGCATTTCGGAGAAAAATTTGACTCTGCAAACTGCCAAAAAACCTGTGATAATTGTTGCACGGTTAACAGTTTTGTTGAGAAGGACATCACTAATATAGCGAAGCAACTGGTTGAACTAGTGAAATCAACAGGCCAGCAGTATTCATCATCTCATATTTTAGAAGTATATAGAGGATCCTTCAGCCAATTTGTTAAAAGACACAGACATGAGACTTTGAGTCTGCATGGTGCGGGAAAACATCTAGCCAAGGGTGAAGCTTCCCGTGTATTACGTCACCTTGTTACTGAGGAGTTCCTTGTGGAAGAAGTTAAAAAAAGTGATATTTATGGATTTGTGTCATCAGTGCTAAAGGTGAATGAATCCAAGGTTCAAAATCTCTGCTTTGGTGGGCACACTATAACATTAAGATTCCCTAGCTCTGCAAAAGCAACTAAACTGAGCAAATCAGGAGCAACTCCTGCAAAAGGCTCATTGACATCTGAGAGGTTAAGTCCTCCAAGAGTTGATACTCCAGCCCAATCCAACTCTAATGTCGACTTGAACCTCTCAGCAAAATTGTACTCTGCTTTGCGAATGCTTCGAACTCTTCTTGTTAAAGAAGCCGGTGACGGAGTCATGGCATACCACATATTCGGGGTTAAGAGAAGTAGATATGGGGACCGATTATTGGAAACCATTGAAGCTACCATCAAAGAACACTACAAAACAGATAGTAGCAGCAATGACAGTAATGACTCAGCAAAGAAAAGGATGACTTCACCAGAAGCACCGGCCGGTCTAAGAAAAGAGAAGAAGAGATGCAAATGGTGGTGCAGATGGAAATCTAGAAGATGA
Protein:  
MAARLTVCRIQNSQKFHHSQVEKHNSNETNGKISELGRCMASSFPSSNVNAMGDGDNLQWHSEAKASMFNNSNTKVLGGSLRNPSVHSGQLKQSAEVLANEIDDDDLLKDIDVDQIVSEHYQSTCTLQPSVSKFPPITPSVDKKAFSGQEEPRLPPELCSICSHGCQLGLCPEAASHLQEKKDMLIAVSNELLDNATNLSPDQIEKLRQNRLQLNRQIQLLEKHLSDVERQKSHFSASTATRTFQYGTPQSASISTEPIRFDAQVHLHNEPNGYENWNSSSVSFSSANSIGVSGGVGRKPYIPKIVEVNYIEGSHDQKWSSRDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGCDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQDQIMHLLQANIPAAYLSANMDWPEQLEILRELTSDYCKYKLLYVTPEKVARSDVLLRHLDSLNTRDLLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKYPKTPVLALTATATASVKEDVVQALGLVNCTIFRQSFNRPNLWFSVIPKTKKCVEDIDKFIKENHFDECGIIYCLSRMDCEKVAEKLQEYGHKAAFYHGNMDPAQRASTQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCILYYSYSDYIRVKHMISQGVVEQSPLVSGYNRFNNSGRILETNTENLYRMVSYCENDVDCRRLLQLLHFGEKFDSANCQKTCDNCCTVNSFVEKDITNIAKQLVELVKSTGQQYSSSHILEVYRGSFSQFVKRHRHETLSLHGAGKHLAKGEASRVLRHLVTEEFLVEEVKKSDIYGFVSSVLKVNESKVQNLCFGGHTITLRFPSSAKATKLSKSGATPAKGSLTSERLSPPRVDTPAQSNSNVDLNLSAKLYSALRMLRTLLVKEAGDGVMAYHIFGVKRSRYGDRLLETIEATIKEHYKTDSSSNDSNDSAKKRMTSPEAPAGLRKEKKRCKWWCRWKSRR